SE3320418

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7883
  • citrus sinensis
  • SE3320418
  • Mutator
  • M16
  • chrUn:84913018-84913157
  • TTATCTTAG
  • TAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATCT     ATCCC                          A  C           C   ------     T
      TAGGG     GCTACGTTACGTTAATCGTAACGTAC TC ACACACAGCAA AGT      TCCCA 
      |||||     |||||||||||||||||||||||||| || ||||||||||| |||      ||||| G
      ATTCC     CGATGCAATGCAATTAGCATTGCATG AG TGTGTGTTGTT TCA      AGGGT 
GATTCT     GACCA                          C  -           A   TCGCCC     G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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