SE3320420

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7885
  • citrus sinensis
  • SE3320420
  • Mutator
  • M21
  • chrUn:5330913-5331071
  • CTTATGATA
  • TTATGATAGGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
 C      TA   - AAAA                        C               C           -CAGT    TA
  TTATGA  GGG C    TTATGTTGCAACTGTGGTATGGTA TACAGTTGTTTTCAG CGTTGGATCCA     TGTA  
  ||||||  ||| |    |||||||||||||||||||||||| ||||||||||||||| |||||||||||     ||||   
  AGTATT  CCC G    GATACAACGTTGACACCATACTAT GTGTCAACGAAAGTT GTAATCTAGGT     ACAT  
AT      -C   A -GTC                        A               A           TAATT    TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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