SE3320424

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7889
  • citrus sinensis
  • SE3320424
  • Mutator
  • M22
  • chr1:14977738-14977896
  • TTTTAAATA
  • TTTAAATAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 T      T   ACAAAA                                                 CT     CACATA
  TTTAAA AGG      TTATGGTGCAACTGTGGTACCATACCACAGCTGCACCTAGCCATTAGAT  AGCTG      
  |||||| |||      |||||||||||||||||||||||||||||||||||||||||||||||||  |||||      T
  AAATTT TCC      GATACCACGTTGACACCATGGTATGGTGTCGACGTGGATCGGTAATTTA  TCGAT      
AT      -   CAGATC                                                 AT     ATCATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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