SE3320426

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7891
  • citrus sinensis
  • SE3320426
  • Mutator
  • M5
  • chr9:9112084-9112251
  • CATATTTCA
  • GGGTCAGGCTACAGTGCAACTGTGGTACCGTGCCACAGTTGCACCAGCCGTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
CATATTTCA    C     ACA                                -           -      AAATGAGTGGGG
         GGGT AGGCT   GTGCAACTGTGGTACCGTGCCACAGTTGCACC AGCCGTTGGAT CCACTC            
         |||| |||||   |||||||||||||||||||||||||||||||| ||||||||||| ||||||             
         CCTA TTTGA   CACGTTGACACCATGGCACGGTGTCAACGTGG TTGGCAACCTA GGGTGA            
ACTTTATAC    T     CAC                                G           A      ATAAGTTCACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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