SE3320440

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7905
  • citrus sinensis
  • SE3320440
  • Mutator
  • M22
  • chrUn:32805707-32805865
  • TACTTTAAC
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTTTAAC  ATAAAA                                A      A     A   C  A   CACACA
         GG      CTATGGTGCAATTGTGGTATCATACCACAGCT CACCTA CCATT GAT CA CTG      
         ||      |||||||||||||||||||||||||||||||| |||||| ||||| ||| || |||      T
         CC      GATACCACGTTGACACCATGGTATGGTGTCGA GTGGAT GGTAA CTA GT GAT      
CAATTTCAT  CAGATC                                C      C     C   A  C   ATCATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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