SE3320450

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7915
  • citrus sinensis
  • SE3320450
  • Mutator
  • M11
  • chr3:21032211-21032350
  • TAATTTAAA
  • AGGCCAGTGCTATGTTACGTTAAACGTAACATACACACACTCACAGCAACAGTAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTTAA   -C  GT                     CA        C   C             AAATG
        AGG  CA  GCTATGTTACGTTAAACGTAA  TACACACA TCA AGCAACAGTAATA     
        |||  ||  |||||||||||||||||||||  |||||||| ||| |||||||||||||      
        TCC  GT  TGATGCAATGCAATTTGCATT  ATGTGTGT AGT TTGTTGTCATTGT     
AAATTTAA   TA  -G                     AC        A   A             ACAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3