SE3320453

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7918
  • citrus sinensis
  • SE3320453
  • Mutator
  • M37
  • chr1:20254651-20254786
  • TTTTTATTA
  • AGGCTTTTGCTACCTTACATGCACGTAAGGTACAGCCTCTCGCTGGTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTATT   CTT                                     ---------TG     CCCAA
        AGG   TTGCTACCTTACATGCACGTAAGGTACAGCCTCTCGC           GTGGG     
        |||   |||||||||||||||||||||||||||||||||||||           |||||     G
        TCC   GACGATGGAATGTACGTGCATTCCATGTCGGAGAGTG           CACCT     
ATTATTTT   CTC                                     TTTTGAGTCTA     AAAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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