SE3320455

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7920
  • citrus sinensis
  • SE3320455
  • Mutator
  • M13
  • chr2:28296284-28296413
  • TATTTATAT
  • TATTTATATGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
    TT   T    AATG                  C      T           A        AT
 TAT  ATA GGGT    CTAAGTTACATGCATGTA CTTACA CCCTCTCACAT AATAGTGT  
 |||  ||| ||||    |||||||||||||||||| |||||| ||||||||||| ||||||||   
 ATA  TAT CCTA    GATTCAATGTACGTACAT GAATGT GGGAGAGTGTA TTATCATA  
T   TT   -    GGGA                  A      T           C        GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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