SE3320508

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7973
  • citrus sinensis
  • SE3320508
  • Mutator
  • M67
  • chr2:7078752-7078949
  • TTTTTAGGG
  • AGGGGGATCATGATTCTCTCCTGATCTGATCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTT       T            C        T   ATCA     -------------------------------------A   AACTCAATCACTGATTGGTTGTTAATAAAT
     AGGGGGA CATGATTCTCTC TGATCTGA CAT    TGAGT                                      AAT                              
     ||||||| |||||||||||| |||||||| |||    |||||                                      |||                               
     TTTTCCT GTACTAGGAGAG ATTAGACT GTA    ACTCA                                      CAT                              
GGGAT       T            A        C   -ATG     AAAATTACTAAAAAATAATACACAAAAAATCACCATCA   ACCCATGCTAAATTGAAGAAAATGAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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