SE3320530

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7995
  • citrus sinensis
  • SE3320530
  • Mutator
  • M5
  • chrUn:82321214-82321372
  • TCAACTTTG
  • CAACTTTGGGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T   CT       -GAAC  TA                                   A A        T    -   CCCC
 CAA  TTGGGGG     CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTA C GTTGGATG CAGT GGA    
 |||  |||||||     ||  ||||||||||||||||||||||||||||||||||| | |||||||| |||| |||    A
 GTT  AACTCCT     GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGAT G CAACCTAC GTCA CCT    
    TC       AGTCC  TG                                   C G        -    A   AATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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