SE3320541

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8006
  • citrus sinensis
  • SE3320541
  • Mutator
  • M71
  • chr3:20053730-20053900
  • CCGATAGAT
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
    CCG     - GGAGAAGTCTATGTTACGGCTTCTGTAAGTAACAGCAGCCAATGGGGAACTTCCACGGGTGCTAGAGGAGAGAG
       ATAGA T                                                                          
       ||||| |                                                                           
       CCCCT T                                                                          
TAGATAG     G ACCGATGCCACGTCTTCGACGTTCATTGTCGAAGCTTGAATGGGTAAAGGTAGTGGAACGTAACCCTGGAGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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