SE3320542

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8007
  • citrus sinensis
  • SE3320542
  • Mutator
  • M80
  • chr9:320989-321149
  • CTTATTTAA
  • TATTTAAGGAAAATGCTTGGTAAAGAGAAGAACGAGAGAAAGACGAGAGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
CT  TT      -AAA    T   AA       A         A          ATAAAGAAGAAAATGATAAAGAGAGAG
  TA  TAAGGA    TGCT GGT  AGAGAAG ACGAGAGAA GACGAGAGAA                           
  ||  ||||||    |||| |||  ||||||| ||||||||| ||||||||||                           T
  AT  ATTCCT    ACGA CCA  TCTCTTC TGCTCTCTT CTGCTCTTTT                           
 A  TT      CATC    T   CA       G         A          AAAATAGGAGAGAGAGAGATGGGTGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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