SE3820030

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8348
  • Solanum tuberosum
  • SE3820030
  • Mutator
  • M4
  • chr06:9562427-9562656
  • TTTTAAATA
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTAAATA   GTAATGCTAAATGACCAGAAAATTTGGTCAGAAATTAAAAAAATTTATAATATCTTTTTTCTTTTAAAATAAACTAACTTTTTTTCATTTTTTAATTACAAGGT
         TGG                                                                                                        
         |||                                                                                                         
         TTT                                                                                                        
  TTATAAA   CCTTTTTAGGAAAACCGGTTTTTTAAACCGGTCTTAAACCGGTTTTACCATAAAATGGATACAATAAAATAGAAAAACTTATAAAAATTGGAAAATTGAAATTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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