SE3830090

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8408
  • Solanum tuberosum
  • SE3830090
  • hAT
  • Hat19
  • chr06:53579485-53579621
  • GTCAAAAG
  • AGCTAAGTTGCACGGACTCTTCACTTTCGATG

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCAAA G   A     A           ---CTT      CCGCACC                   ATAC
      A CTA GTTGC CGGACTCTTCA      TCGATG       CGTGTCGGATTCTCCAAAA    
      | ||| ||||| |||||||||||      ||||||       |||||||||||||||||||    A
      T GAT CAACG GCCTGAGAAGT      AGTTAC       GTACAGCCTAAGAGGTTTT    
GAAAAC G   A     A           TTTTTC      ---CCAC                   CATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3