SE3810096

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8414
  • Solanum tuberosum
  • SE3810096
  • Tc1/Mariner
  • St11
  • chr06:4983639-4983908
  • TA
  • TACTCCCTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
     C    ---    CATATTAGTTGATCATTTTTCTTTTTACACGCATATTAAAAAAATCATATATAAGAAGATAATTTTACTAATTCACCCCTGAAAAAACATCTTGAAAATTTTACAAACAAATGTGAACA
TACTC CTCC   GTCT                                                                                                                       
||||| ||||   ||||                                                                                                                       C
ATGAG GAGG   GGTA                                                                                                                       
     C    AAA    TAATATCAACTAGTAAAATAATTTTTATTAACAGAGTATAATCAACAGGTGGAATAATTTAGTTCTTTCGTAATTAATTTTAAAAGGATATAATGGGAATGTTAAATAAGAAAAACTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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