SE3840110

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8428
  • Solanum tuberosum
  • SE3840110
  • CACTA
  • Ca2
  • chr09:5468945-5469087
  • ATA
  • CACTACAAGAAAAGTGTGAATTACATGGGGATTTTTCTGGGGATTAGTATGAAAATCCGTAGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATA                                                        CC        CT
   CACTACAAGAAAAGTGTGAATTACATGGGGATTTTTCTGGGGATTAGTATGAAAAT  GTAGGAAA  
   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||  T
   GTGATGTTCTTTTCACACTTAATGTACCCCTAAAAGGATCCCTAATCATACTTTTA  CGTCCTTT  
ATA                                                        AA        TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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