SE3840124

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8442
  • Solanum tuberosum
  • SE3840124
  • CACTA
  • Ca2
  • chr09:15098786-15098916
  • ATT
  • TCACTACAAGAAAAGTGTGAATTACATGGGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
AT                G   A            --   TGTGAAAATTCGTAGGAAACTTATTT
  TCACTACAAGAAAAGT TGA TTACATGGGGAT  TAG                          
  |||||||||||||||| ||| ||||||||||||  |||                          T
  AGTGATGTTCTTTTCA ACT AATGTACCCCTA  AGG                          
TT                A   A            AA   ATCCCTAATCATACTTTTTAACGTCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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