Plant MITE

SE3830129

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_8447
Solanum tuberosum
SE3830129
hAT
Hat23
chr04:8070709-8070844
GAAATCGT
AATCGTCTATGTTGCTCAGACTCTTCAAAAATGCCGCCA

Secondary structure and sequence

TSD TIR

5'

3'

GA   CG            A               --CCG   AATG A   C T   C         AG
  AAT  TCTATGTTGCTC GACTCTTCAAAAATG     CCA    C TGT G ATC TTCAAAAGT  
  |||  |||||||||||| |||||||||||||||     |||    | ||| | ||| |||||||||  T
  TTA  GGATACAACGAG CTGAGAGGTTTTTAT     GGT    G ACA C TAG AAGTTTTTA  
TG   AA            C               AACAG   --GA C   A C   -         CG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE3830129

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE3830129