SE3840226

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8544
  • Solanum tuberosum
  • SE3840226
  • CACTA
  • Ca2
  • chr12:1703383-1703525
  • TTA
  • ACACTACAAGAAAAATGTGAATTACATGGGGATTTCCCTGGGGATTAGTATGAAAATTTGCAGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT              A                    C                        -CA    AAT
  ACACTACAAGAAAA TGTGAATTACATGGGGATTT CCTGGGGATTAGTATGAAAATTTG   GAAA   
  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||   ||||    
  TGTGATGTTCTTTT ACACTTAATGTACTCCTAAA GGACCCCTAATCATACTTTTAGGC   CTTT   
AT              C                    A                        ATC    GAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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