SE3830249

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8567
  • Solanum tuberosum
  • SE3830249
  • hAT
  • Hat19
  • chr01:75413172-75413308
  • TTTTTTGG
  • GGCTATGTTGCTCGGACTCTTCAAAAATGTTATCGGGTGTGTGTCAGATCCTTCAAAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTT     T                         ATC G  G     CA              AG
      GGCTA GTTGCTCGGACTCTTCAAAAATGTT   G GT TGTGT  GATCCTTCAAAAGT  
      ||||| |||||||||||||||||||||||||   | || |||||  ||||||||||||||  T
      TTGAT CAACGAGTCTGAGAGGTTTTTACAA   C TG GCACA  CTAGGAAGTTTTTA  
GGTTTT     T                         CGA G  G     AC              CA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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