SE3830331

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8649
  • Solanum tuberosum
  • SE3830331
  • hAT
  • Hat19
  • chr03:6244894-6245030
  • ATTTATGC
  • CTAAGTTGCTCGGACTCTCCAAAAATGTTGCCG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTATGC   A    C         C      T    C  CACC                      C
        CTA GTTG TCGGACTCT CAAAAA GTTG CG    CGTGTTGGATCCTTCAAAAATA 
        ||| |||| ||||||||| |||||| |||| ||    |||||||||||||||||||||| A
        GAT CAAC AGCCTGAGA GTTTTT CAGC GC    GCACAGCCTAGGAGGTTTTTAT 
CGTATTTA   A    A         A      C    T  CCAC                      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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