SE3830425

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8743
  • Solanum tuberosum
  • SE3830425
  • hAT
  • Hat19
  • chr12:55584696-55584832
  • ACTCCAAC
  • CTATGTTGTTCGGACTCTCCAAAAATGTTAACG

Secondary structure and sequence

TSD    TIR
5'



3' 
ACTCCAAC        T     C   CC         A   CACCTA   CA      C        C
        CTATGTTG TCGGA TCT  AAAAATGTT ACG      TGT  GATTCT CAAAAATA 
        |||||||| ||||| |||  ||||||||| |||      |||  |||||| |||||||| A
        GATACAAC AGCCT AGA  TTTTTACAA TGC      ACA  CTAAGA GTTTTTAT 
CAACCTCA        T     C   AA         C   CCACAC   AC      A        C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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