SE3810436

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8754
  • Solanum tuberosum
  • SE3810436
  • Tc1/Mariner
  • St2
  • chr11:34382969-34383212
  • TA
  • TACTCCCTCCGTCCCATTTTATGT

Secondary structure and sequence

TSD    TIR
5'



3' 
         C      T          GTAATTTGACTCGGCACGGAGTTTAAGAAAGCAAGGAAGACTTTTAAAACTTGTGGTCCAAAATGAATGATAGAAATTTGTGTGGCTGTAAATCA
TACTCCCTC GTCCCA TTTATGTGAG                                                                                               
||||||||| |||||| ||||||||||                                                                                                
ATGAGGGAG CAGGGT AAATACACTG                                                                                               
         A      T          AATGAAAAGAAAAAATCAGTCAGGGTTTTTCTTACTGTGTAAAGATATAATTCATTGTTAAATTGATATTTTACAGATAAAATGGGAATTACTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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