SE3830441

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8759
  • Solanum tuberosum
  • SE3830441
  • hAT
  • Hat19
  • chr10:48854548-48854683
  • CTACTACT
  • CTATGTTGCTCGGACTCTTCGAAAAAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTACTACT   T                     A  CATCAGGTG       G   C         AG
        CTA GTTGCTCGGACTCTTCGAAAA GT         CGTGTCG ATC TTCAAAAAT  
        ||| ||||||||||||||||||||| ||         ||||||| ||| |||||||||  T
        GAT CAACGAGCTTGAGAGGTTTTT CA         GCACAGC TAG AGGTTTTTA  
TCATCATC   T                     A  ACAACGTGG       -   T         CG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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