SE3830531

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8849
  • Solanum tuberosum
  • SE3830531
  • hAT
  • Hat19
  • chr05:10595843-10595979
  • CGTAGAAC
  • ACCTATGTTGCTCGAACTCTTCAAAAATGTCCCC

Secondary structure and sequence

TSD    TIR
5'



3' 
CGTAGA  -   T        A               CC  AGGTGA                    AG
      AC CTA GTTGCTCG ACTCTTCAAAAATGT  CC      GTGTCGGATCCTTCAAAAGT  
      || ||| |||||||| |||||||||||||||  ||      ||||||||||||||||||||  T
      TG GAT CAACGAGC TGAGAGGTTTTTACA  GG      CACAGCTTAGGAGGTTTTTA  
 CAAGA  C   T        C               AC  CGTGGG                    CG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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