SE3840571

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8889
  • Solanum tuberosum
  • SE3840571
  • CACTA
  • Ca3
  • chr11:1508952-1509227
  • AGA
  • CACTACTAAAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
AGA        -     --TCACT         CTGAAAATGTATAGTGGTTTTTACCACAGATATTTTTATTCGATGAGTGAGAAAAGAACAAATAGTTGTGTTTTTCTTTCACATGGAAAAAATTAGGACGCTTCTC
   CACTACTA AAATA       ATTTTCCCA                                                                                                          
   |||||||| |||||       |||||||||                                                                                                          A
   GTGATGAT TTTAT       AAAGGTAAC                                                                                                          
AGA        C     CTCCAAG         GTTTAGTTGCTTTTAAACACAATATTTTTACTAAAAGGGTGAGTTAAAAGTGGATTGGTTAAGTGACTCTTTTGTGTACCACTCTTCGTTTAAGAGTGACTTTATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3