SE3820592

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8910
  • Solanum tuberosum
  • SE3820592
  • Mutator
  • M34
  • chr02:47219811-47219979
  • TTAGAAGAT
  • GGGTAAAACTTACCCGCAACGGGTGTTTACACCAAGTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAGAAGAT   T              A                    --------       CATGTCATGTGTTTAAATTTATAGT
         GGG AAAACTTACCCGCA CGGGTGTTTACACCAAGTCA        ATACATG                         
         ||| |||||||||||||| ||||||||||||||||||||        |||||||                         T
         CCT TTTTGAATGGGCGT GCCCACAAATGTGGTTCGGT        AAGTAAT                         
TAGAAGATT   T              G                    TACTTTAA       AATACACTAAATTACTTCATTTTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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