SE3830647

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8965
  • Solanum tuberosum
  • SE3830647
  • hAT
  • Hat66
  • PGSC0003DMB000000396:494846-494979
  • CCTCTAAT
  • TATGTTGCTCGGACTCTTCAAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
CCTCTAATC              T  T     ATTTCATCGGGTA    TAAGATCCTCCAAAAGTAGTGCATT
         TATGTTGCTCGGAC CT CAAAG             CGTG                         
         |||||||||||||| || |||||             ||||                          
         ATACAACGAGCCTG GA GTTTT             CACA                         
TAATCTCCA              T  -     -------------    ACGGTGTGGCACAACCTAGGAGGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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