SE3830662

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8980
  • Solanum tuberosum
  • SE3830662
  • hAT
  • Hat19
  • chr04:2526803-2526938
  • GTCCAGAG
  • TCCAGAGCTATGTTGCTTGGACTTTCCAAAATTGTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
G  CA  G                  CC    T     CCTCACCCA    A   T        TGCA
 TC  GA CTATGTTGCTTGGACTTT  AAAA TGTTG         TGTC GAT CTCCAAAA    
 ||  || ||||||||||||||||||  |||| |||||         |||| ||| ||||||||     
 AG  CT GATACAACGAGTTTGAGA  TTTT ACAAC         ACAG CTA GAGGTTTT    
G  AC  G                  AA    T     TGCCCACGC    C   T        CATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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