SE2160008

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8992
  • physcomitrella Patens
  • SE2160008
  • Micron
  • Mim3
  • scaffold_22:1742075-1742295
  • ATATATA
  • ATATATATATAAAAGGAATTTTTAAATTGACCCAAGAATTTACTAAATTGACCCACCCATC

Secondary structure and sequence

TSD    TIR
5'



3' 
        T     --AAA      T  A            AA    C              ---    TT     TCATCAAAAAATTCTCCACTTTTGGTTCTGCATT
   ATATA ATATA     GGAATT TT AATTGACCCAAG  TTTA TAAATTGACCCACC   CATC  AACCA                                  
   ||||| |||||     |||||| || ||||||||||||  |||| ||||||||||||||   ||||  |||||                                   
   TATAT TATAT     CCTTAA AA TTAACTGGGTTC  AAAT ATTTAACTGGGTGG   GTAG  ACCAA                                  
ATA     C     ACATC      C  C            GA    A              ATA    TA     CTCTTAAGTTGGTAAAAAAGTAACTAAAAACTGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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