SE2160014

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_8998
  • physcomitrella Patens
  • SE2160014
  • Micron
  • Mim4
  • scaffold_334:315212-315425
  • TATATAT
  • ATATAGGGAGTTGTTAAAGCCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAT                       ATCTTGCATTACCATCTC   AT  ATTCCGTCCATCTCCATCTCTTATTCTATATCCCTCTTCTCCCTATTCTCAATTCCACT
   ATATAGGGAGTTGTTAAAGCCAC                  ATG  CG                                                           
   |||||||||||||||||||||||                  |||  ||                                                           G
   TATATCCCTCAACAATTTCGGTG                  TAG  GG                                                           
ATC                       ------------------   --  GTTTAGTACACTACTAATTAAAACCTCTATCCTTTGTTCCTACCCCTATCCTTTATTCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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