SE2850008

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9013
  • Sorghum bicolor
  • SE2850008
  • PIF/harbinger
  • To4
  • chromosome_8:7443730-7443966
  • TAA
  • AGGCCTTGTTTAGTTCGCGAAAATTTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      T        - GC                 GCTACTGCAGCACTTTCATTTGTATTTGATAATTATTGTCCAATCACGGACTAATTAGACTCAAAAGATTCGTCTAGCAAA
  AGGCCT GTTTAGTT C  GAAAATTTTTAGATTTG                                                                                 
  |||||| |||||||| |  |||||||||||||||||                                                                                 T
  TCCGGA CAAATCAA G  TTTTTAAAAGTTCTAAG                                                                                 
AA      T        A -A                 AAGTAGTTTAGCTTATAAATCTATGTACGTACTTTGTAATTTATATCTGTTTTTTTTTTGATTAACATGTCAAACGGACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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