SE2850042

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9047
  • Sorghum bicolor
  • SE2850042
  • PIF/harbinger
  • To10
  • chromosome_3:64329501-64329645
  • TAA
  • AGGCCTTGTTTGGATGTTGTCGGATTCACCTCAATCGACATGTGTTGAAGTGGATTGAGGTGAAATTTATTTTAAGTTCCACTCCAATCCACCCCAACACATATGGATTGATGTGAATCCGATTACATCCAAACAAGGCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 T           C      G C        AA        A    A      T
  AGGCCTTGTTTGGATGT GTCGGATTCAC TCAATC A ATGTGTTG  GTGGATTG GGTG AATTTA 
  ||||||||||||||||| ||||||||||| |||||| | ||||||||  |||||||| |||| |||||| T
  TCCGGAACAAACCTACA TAGCCTAAGTG AGTTAG T TACACAAC  CACCTAAC TCAC TTGAAT 
AA                 T           T      G A        CC        C    C      T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3