SE2850066

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9071
  • Sorghum bicolor
  • SE2850066
  • PIF/harbinger
  • To1
  • chromosome_1:17330750-17330998
  • TAA
  • AGGCCTTGTTTAGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             A          TTTTAGATTTTGACACTGTAGCACTTTCGTTTTTATTTGACAAACATTGTCCAATCATGGAGTAACTAGGCTTAAAAGATTCGTCTCGCGATTTACAG
  AGGCCTTGTTTAG TCCAAAATTT                                                                                                  
  ||||||||||||| ||||||||||                                                                                                  A
  TCCGGAACAAATC AGTGGGGTTT                                                                                                  
AA             A          TTGTTTTTTGAAAAGTTCTAAGGGGCAGTGTAACTTAGAACGCTGTGTACGTACCTCGTAATTTATATCTACTTTTGTTTTTGATTAACGTGTCAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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