SE2850091

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9096
  • Sorghum bicolor
  • SE2850091
  • PIF/harbinger
  • To4
  • chromosome_9:2935307-2935544
  • TTA
  • AGGCCTTGTTTAGTTTCCAAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               --TCC        -----TC    TTCCCCGTTACATCGAATCTTTAGACGCATGCATAGAACATTAAATATAAATAAAAGAAATAACTAATTACACAGTTTGTC
  AGGCCTTGTTTAGTT     AAATTTTT       AAGA                                                                                 
  |||||||||||||||     ||||||||       ||||                                                                                 T
  TCCGGAACAAATCAA     TTTAAAAA       CGAT                                                                                 
AT               CCCCT        CCGAAAC    GATATCGTGAAAGCAAACATAAACTGTTTATAATAGGTTAATATCTGATTAATCCGAGTTTTCTAAACAGAGCGTTTAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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