SE2810096

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9101
  • Sorghum bicolor
  • SE2810096
  • Tc1/Mariner
  • St8
  • chromosome_2:64999590-64999740
  • TA
  • TACTCCCTCCGTTCCAAATTGTAAGACGTTTTGGCTTTTCTAGATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
              C     G            GC            AATT      A        C  TAC   GT
TACTCCCTCCGTTC AAATT TAAGACGTTTTG  TTTTCTAGATAC    GCTTTT CTATGTAT TA   ATA  
|||||||||||||| ||||| ||||||||||||  ||||||||||||    |||||| |||||||| ||   |||  C
ATGAGGGAGGTAAG TTTAA ATTCTGTAAAAC  AAAAGATCTATG    CGAAAA GATACGTG AT   TAT  
              -     G            AA            -CAT      C        A  --C   AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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