SE2850150

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9155
  • Sorghum bicolor
  • SE2850150
  • PIF/harbinger
  • To4
  • chromosome_10:46445223-46445470
  • TGA
  • AGGCCTTGTTTAGTTCTCAAAATATTTTGTAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TG                T     TAT          TTTTCA   TTTCCATCATATTAAATTTTGCGGTACATGCATGGAGCACTAAATATAGATAAATGAAATAACTAATTACATAGTTTACT
  AGGCCTTGTTTAGTTC CAAAA   TTTGTAAAAT      GAT                                                                                
  |||||||||||||||| |||||   ||||||||||      |||                                                                                 
  TCCGGAACAAATCAAG GTTTT   AAACGTTTTA      TAT                                                                                
AG                -     -TT          --TCTT   CATCGTGAAAGAAAACATAAACTGTTTATAACAGGCTAGTACCTGATTAATCCGAGTTTTCTAAGCAGAGCGTTTAATGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3