SE2850157

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9162
  • Sorghum bicolor
  • SE2850157
  • PIF/harbinger
  • To11
  • chromosome_3:12385813-12386049
  • TAA
  • AGGGGGTGTTTGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               --TTCTCCC   AACTTTACTGCACGTCACATCGAAAGTTTGGACACATACATGGAGTACTAAATATAGACTAATTACGAAACAAAAAATACAGGTAGAGAG
  AGGGGGTGTTTGGTT         GTA                                                                                          
  |||||||||||||||         |||                                                                                          T
  TCCCCCACAAACCAA         TTT                                                                                          
AA               CCCTCACCA   CAAATTGTTCATGACATCGTAAAAGTAGAATAAACTTTTAATAACAGGTTAGTATCTGATTAATCCGAATTTTCTAAACAGAGCGTTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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