SE2810172

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9177
  • Sorghum bicolor
  • SE2810172
  • Tc1/Mariner
  • St8
  • chromosome_2:74904312-74904462
  • TA
  • TACTCCCTCCATTCCAAATTATAAGACATTTTGGCTTTTATAGATACATTGCTTTTACTATGTATCTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
             C     T  A   CAT          A         TG              C    CATAGC
TACTCCCTCCATT CAAAT AT AGA   TTTGGCTTTT TAGATACAT  CTTTTACTATGTAT TAGA      
||||||||||||| ||||| || |||   |||||||||| |||||||||  |||||||||||||| ||||       
ATGAGGGAGGTAA GTTTA TA TCT   AAACCGAAAG ATCTATGTA  GAAAATGATACGTG ATCT      
             A     T  C   -AC          G         TA              A    AATATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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