SE2850202

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9207
  • Sorghum bicolor
  • SE2850202
  • PIF/harbinger
  • To23
  • chromosome_3:59701550-59701843
  • TTA
  • AGGGGGTGTTTAGTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 -----CC    -----  --  -    AAAATTTGGGTTTTGGTTCATCATTTTGCAAAATGGAACTAAACACCATGCAAAATTTTTGGCAAAAAGGTGGTTATTCTTCATTTTGGATTTTGGCCTCAAGAGGC
  AGGGGGTGTTTAGTTCC       TTCT     AT  TC AAAA                                                                                                           
  |||||||||||||||||       ||||     ||  || ||||                                                                                                           C
  TCCCCCACAAATCAAGG       ACGT     GT  TA GGTT                                                                                                           
AT                 TTTTTTT    TTTAC  TT  C    GATGAAACCTTACTACTTTACGTTTTACGGTTTGAAAAGTCCCAGTACAAATCAAGGTAGGTTTTACGTCTTAAATAACAGGAGCACTCCGAGAAAACCCAAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3