SE2850203

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9208
  • Sorghum bicolor
  • SE2850203
  • PIF/harbinger
  • To4
  • chromosome_9:7234204-7234440
  • TAA
  • AGGTCTTGTTTAGTTCACGAAAATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               CA              TTTG  TACTGTAACACTTTCATTTGTATTTGGTAATTATTATCCAACCATGGATTAATTAGACTTAAAAGATTCGTCTCGCAAATT
  AGGTCTTGTTTAGTT  CGAAAATTTTTGGT    GC                                                                                 
  |||||||||||||||  ||||||||||||||    ||                                                                                 A
  TCCGGAACAAATCAA  GTTTTTAAAAGTTC    TA                                                                                 
AA               AG              ----  AAGAACAGTTTAACTTAGAATGCCGTGTACGTACCTCGTAATTTATATCTATTTTTTTATTGATTAATGTATCAAACGGAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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