SE2850209

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9214
  • Sorghum bicolor
  • SE2850209
  • PIF/harbinger
  • To36
  • chromosome_4:54677152-54677390
  • TTA
  • AGGCCTTGTTTAGTTCACGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               CA     --    TTGATTTTGGCTACTGCAGCATTTTTGTTTGTGTTTAATAAATTCTATTTAATAATGGACTAACTAGGCTCAAAAGATTTGTCTCGTAAA
  AGGCCTTGTTTAGTT  CGAAA  AGTT                                                                                          
  |||||||||||||||  |||||  ||||                                                                                          T
  TCCGGAACAAGTCAA  GTTTT  AGGG                                                                                          
AT               AG     AA    TTTTAAAAAATTCTAAGAAGTAGTGTAGCTTAGAAATTTGAGTACGTACTTCATAATTTATATCTATTTTTATTTTAGATTAATGGATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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