SE2810228

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9233
  • Sorghum bicolor
  • SE2810228
  • Tc1/Mariner
  • St16
  • chromosome_1:63100876-63101025
  • TA
  • TACTCCCTCCGTTCCAAATTATAAGTCGCTTTGACTTTTTTGGTACATCCATTTCACTATGCATCTAGATATA

Secondary structure and sequence

TSD    TIR
5'



3' 
      C                                     AC        CA     C           AT
TACTCC TCCGTTCCAAATTATAAGTCGCTTTGACTTTTTTGGT  ATCCATTT  CTATG ATCTAGATATA  
|||||| |||||||||||||||||||||||||||||||||||||  ||||||||  ||||| |||||||||||   
ATGAGG AGGCAAGGTTTAATATTCAGCGAAACTGAAAAAACCA  TAGGTAAA  GATAC TAGATCTGTAT  
      T                                     AA        AC     A           AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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