SE2850240

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9245
  • Sorghum bicolor
  • SE2850240
  • PIF/harbinger
  • To8
  • chromosome_7:51479587-51479783
  • TTA
  • AGGGCTTGTTTAGATCCCTTCTTCTAAACTTTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT           A     -     T   AAC      --GCTCT            --TAA     TAAACAG T       AATT        ACTTTAGCT
  AGGGCTTGTTT GATCC CTTCT CTA   TTTAGA       AAACTTTAGAGC     AGCTC       G GGTCTAA    AGCTCTAA         
  ||||||||||| ||||| ||||| |||   ||||||       ||||||||||||     |||||       | |||||||    ||||||||          
  TCCCGGACAAA CTAGG GGAGA GAT   AAATCT       TTTGAAATCTCG     TCGAG       C CCAGATT    TCGAGATT         
AT           C     A     -   ATA      GAAAATT            TGAAA     -TAAAAA T       ----        ACACTCCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3