SE2850289

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9294
  • Sorghum bicolor
  • SE2850289
  • PIF/harbinger
  • To10
  • chromosome_8:54140310-54140454
  • TTA
  • AGGCCTTGTTTGGATGTAGTCGGATTCGCATCAATCCACATGTGTTGGTGTGGATTGGAGTGGAACTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 A           A                  T         A      C  GAA
  AGGCCTTGTTTGGATGT GTCGGATTCGC TCAATCCACATGTGTTGG GTGGATTGG GTGGAA TT   
  ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||| ||    
  TCCGGAACAAACCTACA CAGCCTAAGTG AGTTAGGTGTACACAACC CACCTAACT CACCTT AA   
AT                 A           G                  T         C      -  ATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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