SE2850299

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9304
  • Sorghum bicolor
  • SE2850299
  • PIF/harbinger
  • To2
  • chromosome_1:14659449-14659697
  • TTA
  • AGGCCTTGTTTAGTTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                 ----------CA        TGCAAAATTTTTCACATTTTCCGTCACATCGAATCTTTAGACGCATGCATGGAGTATTAAATATAAACAAAAATAAAAACTAATTACACA
  AGGCCTTGTTTAGTTCT            GAAAATTT                                                                                          
  |||||||||||||||||            ||||||||                                                                                          G
  TCCGGAACAAATCAAGG            CTTTAGCT                                                                                          
AT                 CTTAAAAAAACT        GTGACATCGTGAAAGCAAACATAAACTGTTTAAAACAGGTTAGTACTTGATTGATCCGAGTTTTCTAAGTAGAACAGTTAAGGCTGGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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