Plant MITE

SE2810304

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_9309
Sorghum bicolor
SE2810304
Tc1/Mariner
St8
chromosome_3:66103647-66103796
TA
TACTCACTTCATTCCAAATTTTAAGTTGTTCTGACTTTTCTAGGTGCATAGCTTTATCTACACATCTAGATATATATTATGTCTAGATACATAGTAAAAGCTATGTATCTAGAAAAGCCAAAACAACTTATATTTGGAATGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

     A             TT         C  A                     AT   CAC           T
TACTC CTTCATTCCAAAT  TAAGTTGTT TG CTTTTCTAGGTGCATAGCTTT  CTA   ATCTAGATATA 
||||| |||||||||||||  ||||||||| || |||||||||||||||||||||  |||   ||||||||||| A
ATGAG GAGGTAAGGTTTA  ATTCAACAA AC GAAAAGATCTATGTATCGAAA  GAT   TAGATCTGTAT 
     G             -T         A  C                     AT   ACA           T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2810304

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2810304