SE2850308

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9313
  • Sorghum bicolor
  • SE2850308
  • PIF/harbinger
  • To1
  • chromosome_10:7244412-7244660
  • TTC
  • GGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTC              ----CACCC      CCAAAAAATTTTCAAGATTTCCCGTCACATCAAATTTTGGAGCACATGCATGAAGCATTAGATATAGACGAAAATAAAAACTAACTGTACAGTT
   GGCCTTGTTTAGTT         TGAAAA                                                                                              
   ||||||||||||||         ||||||                                                                                              T
   CCGGAACAAATCAA         AAAACC                                                                                              
CTT              AGCTTTTAA      TAAAGCCGTGACATCGTAAAAGCAAAAATAAACTGTTTATAATAGGTTAGTATTTGATTGATCCGAGTTTTCTAAGTAGAGCACTAAATGTCCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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