Plant MITE

SE2810313

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_9318
Sorghum bicolor
SE2810313
Tc1/Mariner
St8
chromosome_6:53601999-53602151
TA
TACTCCCTCCATTCCAAATTATAAGACGTTTTGGCTTTTCTAGATACATTGTTTTTACTATGTCTCTAGACATACTGTATATCTAAGTGCATAGCAAAAACTATGTGTATCTAGAAAAGCCAAAACGTGTTATAATTTGGAATGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                        G                        --T      A      -  C    C   C
TACTCCCTCCATTCCAAATTATAA ACGTTTTGGCTTTTCTAGATACAT   GTTTTT CTATGT CT TAGA ATA 
|||||||||||||||||||||||| ||||||||||||||||||||||||   |||||| |||||| || |||| ||| T
ATGAGGGAGGTAAGGTTTAATATT TGCAAAACCGAAAAGATCTATGTG   CAAAAA GATACG GA ATCT TAT 
                        G                        TAT      C      T  -    A   G

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2810313

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2810313