SE2830321

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_9326
  • Sorghum bicolor
  • SE2830321
  • hAT
  • Hat28
  • chromosome_7:11871329-11871525
  • TCTAGAAA
  • TCTAGAAACAGGGGCAGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
        AA              TGGGGTGGGCTGGCCGGGCTGCAGCCTCCTGTGAGCCTGATTTGTACCTTTAAATTAATGGTACTTAACCTCAAAT
  TCTAGA  CAGGGGCAGATCGA                                                                            
  ||||||  ||||||||||||||                                                                            T
  AGATCT  GTCCCCGTCTAGGT                                                                            
AA      --              TTTAACCCTGTTTGCCTCCCCCTTCTCTCCCCCCGATTTATCACTTCCAAATCTTGATCTCGATCTCTGATTACGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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